FOCUS, an innovative and agile model to profile and report organisms present in metagenomic samples based on composition usage without sequence length dependencies.

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Cite FOCUS

Silva, G. G. Z., D. A. Cuevas, B. E. Dutilh, and R. A. Edwards, 2014: FOCUS: an alignment-free model to identify organisms in metagenomes using non-negative least squares. PeerJ, 2, e425, doi:10.7717/peerj.425.

 

 

FOCUS (standalone version) now generates output in the STAMP format