RTMg - Real Time Metagenomics
The RTMg project delivers metagenome annotation services to biologists across several platforms of technology, which include CGI scripting and web services (RTMg.web), the new Android cell phone operating system (RTMg.mob), and all OpenSocial-based social network sites (RTMg.os)
If you use this service, please drop Rob an email and tell him what you think about it. It is still experimental, and we're working on it.
You can read all about using the API and command line tools to annotate metagenomes.
If you use RTMg, please cite Edwards et al., Real time metagenomics: using k-mers to annotate metagenomes. Bioinformatics. 2012 Dec 15;28(24):3316-7. doi: 10.1093/bioinformatics/bts599.
About the lab
Edwardslab is a bioinformatics research group lead by Dr. Robert Edwards at San Diego State University.