HOME     |     DATABASE     |     BLAST     |     RESULTS     |     INFO     |     FAQ


Please select from the menu above what you want to do.
DATABASE Create a BLAST database from publicly available preprocessed metagenomes. Generate a list of fasta files of those metagenomes. View details about the metagenomes or get links to publications for them.
BLAST BLAST sequences in a FASTA file against a database you previously generated.
RESULTS View a list of publicly submitted BLAST jobs or access BLAST jobs using a data ID. The results can be filtered by coverage, identity, e-value or number of hits per metagenome.
INFO Get information about the preprocessing steps used to generate the database files. Find statistics about the mean length distribution of the metagenomes or their source. Access the Google spreadsheet containing the metadata for each metagenomic dataset or the tools used to preprocess the metagenomes.
FAQ Find the answers to your questions.

2011-2013 Copyright © Robert Schmieder |  rschmieder@gmail.com  |  Edwards Lab @ SDSU