Category Archives: SRA

How many bp of metagenomes are there in the SRA?

We were curious about how many bp of metagenomes in the SRA. This was partly inspired by our grant writing, and partly by this question on twitter from Tom Delmont:



This is how to answer the question!

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Describing metagenomes in the SRA

I love standards; there are always so many to choose from. The sequence read archive strives hard to capture appropriate information about the sequences that people deposit, but in the end scientists are people too, and they are never uniform and standard. This means there are a lot of ways to describe metagenomes. To get your data used by other people (and cite your papers), make sure you tag it so we can find it!

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